Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015811716.1_cds_XP_016496814.1_11000
CDS Infomation

[gene=LOC107815712] [db_xref=GeneID:107815712] [protein=premnaspirodiene oxygenase-like] [protein_id=XP_016496814.1] [location=join(36356..37228,38096..38716)] [gbkey=CDS]
Sequence

ATGGAGTTCTTCAACTTCATTTCCTTTTTCTTTTTTGTATCTTTCCTATTTTTGTTAAGG
GAATGGAAGAACTCCAATAACCAAACCAAAAGATTGCCTCCAGGTCCATGGAAATTACCT
TTACTTGGAAGCATGTTTCATATTCTAGGTGGACTCCCACACCATGTCCTAACAAATTTA
GCCAAAAAATATGGACCCCTTATGCACCTTCAACTAGGGGAAATGCCTGTAGTTGTAGTT
ACTTCTCCAGAAATGGCAAAAGAAGTACTCAAAACTCATGATCTCGCGTTTGCATCTAGG
CCTAAACTTTTGGCAGCCGAAATTGTCATTTATAATTGTTCTGATATCGCATTTTGCCCA
TATGGAGATTACTGGAGACAAATGCGTAAAATTTGTATGATTGAATTGCTAAGTGCCAAA
AATGTCAAGTCATTCAGCTCGATTAGACGAGATGAAGTTCATGGTATGATTGAATTTTTT
CGATCATCTACTGGTAAGCAAGTTAATATAACAAAAAGGATTTATCAATTCGCAAGCTCT
ATGACATGTAGATCAGCATTTGGGAAAGTATTTAAAGAGCAAGACGAACTTATACTACTA
GTCAAAAGAAATACAGCCTTAGTTGAAGGGTTTGATGTGGCTGATATATTCCCTTCACTG
AAGTTTCTTCATGTGCTTAGTGGAATGAAGGCTAAAGTTATGGATGTCCACCATAAGTTA
GATGTTATTCTTGAAAATATAATCAATGAACGCAAGAAAATTGCAACTGATGAATTAGGA
GATGAAGGTTTAATAGATGTACTGTTACGACTTATGAAAGAGGGAGGTCTTCAATTTCCT
ATCACCAACGACAACATCAAAGCCATTATTTTTGACATATTTTCTGCGGGAACAGAAACA
TCATCAGCAACAGTTGATTGGGCCATGGTGGAAATGATGAAGAACCAAAGTATACTCGCC
AAAGCTCAAGCAGAGGTAAGAAAGACCTTCAGAGGGAAAGAAACTTTTGATGAAAATGAT
GTCGAGGAGTTGAAATACCTAAAGTTGGTCATTAAAGAAACTTTGAGACTTCATCCTCCA
TTTCCCCTTTTGCTCCCAAGAGAATGTAGGGAAGAAACAGACATAAATGGCTACACTATT
CCTTTCAAAACAAAAGTGATGATTAATGTATGGGCTATTGGAAGAGATCCAAAATATTGG
AATGATGCAGAAATCTTTAAACCTGAAAGATTTGAGCACAATTCTATGGATTTTGTTGGC
AATAATTTTGAATATCTTCCCTTTGGTAGTGGCAGGAGGAATTGCCCTGGGATATCATTT
GGTTTAGCTAACGTTTATTTTCCTCTGGCTCAATTGTTGTATCACTTTGATTGGAAACTT
CCAACTGGAATCAATTCAAGTGAACTGGACTTTACTGAATCGGCTGGAGCAACTTGTTCA
AGAAAGAGCAACCTATACTTGATTGCTACTCCTTATCAACCTTGTCAAGACTGA

Peptide Sequence

PEP ID

XP_016496814.1
PEP Infomation

PREDICTED: premnaspirodiene oxygenase-like [Nicotiana tabacum]
Sequence

MEFFNFISFFFFVSFLFLLREWKNSNNQTKRLPPGPWKLPLLGSMFHILGGLPHHVLTNL
AKKYGPLMHLQLGEMPVVVVTSPEMAKEVLKTHDLAFASRPKLLAAEIVIYNCSDIAFCP
YGDYWRQMRKICMIELLSAKNVKSFSSIRRDEVHGMIEFFRSSTGKQVNITKRIYQFASS
MTCRSAFGKVFKEQDELILLVKRNTALVEGFDVADIFPSLKFLHVLSGMKAKVMDVHHKL
DVILENIINERKKIATDELGDEGLIDVLLRLMKEGGLQFPITNDNIKAIIFDIFSAGTET
SSATVDWAMVEMMKNQSILAKAQAEVRKTFRGKETFDENDVEELKYLKLVIKETLRLHPP
FPLLLPRECREETDINGYTIPFKTKVMINVWAIGRDPKYWNDAEIFKPERFEHNSMDFVG
NNFEYLPFGSGRRNCPGISFGLANVYFPLAQLLYHFDWKLPTGINSSELDFTESAGATCS
RKSNLYLIATPYQPCQD

Transcript Sequence

Gene sequence data has not been registered.